The Seven Bridges Knowledge Center

The Seven Bridges Platform is a simple solution for doing bioinformatics at industrial scale. But sometimes, everyone needs a little help.

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Python library recipes

Who is this for?

The API recipes and tutorials linked to from this page are intended for users who have some familiarity with Jupyter notebooks and want to use the API to extend and automate their analysis. Please also see our Introduction to the API tutorial for some basics on using our API.

okAPI repository

You can find Python example scripts as recipes (which allow you to perform specific tasks) or tutorials (which will walk you through entire analyses) for invoking the API on the Seven Bridges Github repository, okAPI. These recipes and tutorials make use of our Python library.

We recommend that you start with our A Quickstart guide to the API. This parallels the QuickStart for the visual interface and walks you through an entire Whole Exome Sequencing analysis.

Tutorials cover:

See more tutorials on our okAPI repository.

Recipes cover (partial list):

See more recipes on our okAPI repository.

Python library recipes


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